Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846222.1_cds_XP_016509557.1_22480
CDS Infomation

[gene=LOC107827015] [db_xref=GeneID:107827015] [protein=dihydropyrimidinase-like] [protein_id=XP_016509557.1] [location=join(44189..44284,45288..45455,46734..46785,47133..47402,47565..47776,48965..49085,49594..49681,49770..49848,50049..50136,50238..50278,50381..50433,50600..50756,51411..51596)] [gbkey=CDS]
Sequence

ATGGAGTTTTGTCACAGAGTTCAGTTATTGATTCCTTTGGTTTATGTGATTGCTCTTTTT
TCCACCATTTTCGCTGTTGTTTCTGCATCCAACGAGTTTTGTGATTCCACATTTGTTTAT
GGAGATTCTGGGTGCAATGCTCCACCGTCAGTTTCATCAAAGATGCTGATAAAAGGAGGA
ACAGTAGTGAACGCTCATCACAAGGAGGTCGCTGATGTGTATATAGAAGATGGAATAATC
GTGGCAGTGCAGCCTAACATTAAGGTTGGTGATGATATCAGAGTCATTGATGCAACTGGA
AAGTTTATCATGCCAGGAGGAATTGATCCTCACACACACCTCGCTATGGAATTTATGGGT
TCTGAGACAATTGATGACTTCTTCAGTGGACAGGCGGCTGCATTAGCTGGTGGAACAACA
ATGCATATTGACTTTGTTATTCCGGTAAATGGAAGCTTATCTGCAGGTTATGAAGCTTAC
GTAGAGAAAGCAAAGAGGTCATGCATGGATTATGGTTTTCACATGGCAATTACAAAATGG
GATGAAACTGTTTCAGAGGATATGGAAATTATGGTCAAGGAGAAAGGTATCAACTCTTTC
AAGTTTTTCCTTGCTTACAAAGGATCTTTTATGGTTAATGATGAGCTTCTTATGGAGGGA
TTGAAGAGATGCAAGTCCCTTGGTGCCTTAGCTATGGTTCATGCAGAAAATGGGGATGCT
GTATTTGAAGGTCAAAAAAGAATGATTGAACTTGGTATTACTGGTCCAGAGGGACATGCA
TTATCAAGGCCTCCAGTGCTGGAGGGAGAGGCTACTGCTCGAGCTATTCGCTTGGCTGGC
TTTGTGAACACTCCACTGTATGTTGTTCATGTCATGAGCATTGACGCGATGGAAGAAATT
GCCAGAGCTCGGAAGTCAGGTCAGAGAGTTGTCGGGGAGCCAGTAGTTTCAGGTTTAGTT
CTTAATGATTCAGTACTTTGGGACCCTGACTTCCATTTTGCAGCTAGGTATGTGATGAGC
CCACCAATCAGAGCAGTAGGTCATGGGACAGCTCTTCAAGGAGCTCTTGCAACGGGGCTT
CTGCAGCTGGTAGGAACTGATCACTGTACCTTCAACTCAACTCAGAAAGCCCTAGGAATT
GGTGATTTCCGGAAAATACCGAATGGTGTTAATGGTATGGAGGAAAGGATGCATTTGGTT
TGGGATACTATGGTGGCATCTGGTCAAATATCTGTCACTGATTATGTCCGCATAACAAGC
ACTGAATGTGCTCGTATTTTCAATGTCTATCCAAGGAAGGGAGCAATACTTGTTGGGTCT
GATGCAGATATAATCATATTAAATCCAAATTCGAGCTTCGAGATTAGTTCAAAGTCACAC
CATTATAGGACAGATACCAATGTCTATGAGGGTTGGAGAGGCAAGGGAAAGGTTGAAGTT
ACAATTGCAGGAGGAAGGATTGTTTGGGAAAATGATGAGCTGAAAGTTGTTCGTGGTGCT
GGCAAGTACATTGAAATGCCACCTTTTAGTTATCTCTTTGACGGGATAGACAAGGCAGAT
GCAAAGTACCTCTCTTCCTTAAGAGCACCAGTAAAACGGTCAACAACTTGA

Peptide Sequence

PEP ID

XP_016509557.1
PEP Infomation

PREDICTED: dihydropyrimidinase-like [Nicotiana tabacum]
Sequence

MEFCHRVQLLIPLVYVIALFSTIFAVVSASNEFCDSTFVYGDSGCNAPPSVSSKMLIKGG
TVVNAHHKEVADVYIEDGIIVAVQPNIKVGDDIRVIDATGKFIMPGGIDPHTHLAMEFMG
SETIDDFFSGQAAALAGGTTMHIDFVIPVNGSLSAGYEAYVEKAKRSCMDYGFHMAITKW
DETVSEDMEIMVKEKGINSFKFFLAYKGSFMVNDELLMEGLKRCKSLGALAMVHAENGDA
VFEGQKRMIELGITGPEGHALSRPPVLEGEATARAIRLAGFVNTPLYVVHVMSIDAMEEI
ARARKSGQRVVGEPVVSGLVLNDSVLWDPDFHFAARYVMSPPIRAVGHGTALQGALATGL
LQLVGTDHCTFNSTQKALGIGDFRKIPNGVNGMEERMHLVWDTMVASGQISVTDYVRITS
TECARIFNVYPRKGAILVGSDADIIILNPNSSFEISSKSHHYRTDTNVYEGWRGKGKVEV
TIAGGRIVWENDELKVVRGAGKYIEMPPFSYLFDGIDKADAKYLSSLRAPVKRSTT

Transcript Sequence

Gene sequence data has not been registered.